Transcript: LINC01487:3

Basic information

LNCipedia transcript ID: LINC01487:3 
LNCipedia gene ID: LINC01487
Location (hg38): chr3:155240945-155243009
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 790 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00005436
Alternative gene names: XLOC_002886; linc-GMPS-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -200.7825 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01487:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MME-1:3
3.1 lnc-MME-1:4
4.0 LINC01487:3
4.1 LINC01487:3
5.0 LINC01487:3
5.1 LINC01487:3
5.2 LINC01487:3