Transcript: LINC01487:4

Basic information

LNCipedia transcript ID: LINC01487:4 
HGNC Gene Symbol: LINC01487    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1487
Ensembl Gene ID: ENSG00000241336
Ensembl Transcript ID: ENST00000462531
Location (hg38): chr3:155240945-155243124
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 905 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000462531; ENST00000462531.1; RP11-451G4.1-001; OTTHUMT00000351102.1; NONHSAT147261
Alternative gene names: ENSG00000241336; RP11-451G4.1; ENSG00000241336.1; OTTHUMG00000158465.1; LINC01487;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -200.7825 non-coding 
CPAT coding probability 2.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01487:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MME-1:4
3.1 lnc-MME-1:3
4.0 LINC01487:4
4.1 LINC01487:4
5.0 LINC01487:4
5.1 LINC01487:4
5.2 LINC01487:4