Transcript: LINC01488:3

Basic information

LNCipedia transcript ID: LINC01488:3 
LNCipedia gene ID: LINC01488
RefSeq ID: NR_120544
Location (hg38): chr11:69485561-69493543
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3321 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120544; NR_120544.1
Alternative gene names: ; LINC01488


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.3349 non-coding 
CPAT coding probability 48.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01488:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYEOV-6:5
4.0 LINC01488:3
4.1 LINC01488:3
5.0 LINC01488:3
5.1 LINC01488:3
5.2 LINC01488:3