Transcript: LINC01488:5

Basic information

LNCipedia transcript ID: LINC01488:5 
LNCipedia gene ID: LINC01488
Location (hg38): chr11:69485801-69493779
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2375 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019369; NONHSAT022609
Alternative gene names: XLOC_009194; linc-CCND1-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.8807 non-coding 
CPAT coding probability 4.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01488:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MYEOV-5:1
3.1 lnc-MYEOV-6:1
4.0 LINC01488:5
4.1 LINC01488:5
5.0 LINC01488:5
5.1 LINC01488:5
5.2 LINC01488:5