Transcript: LINC01492:1

Basic information

LNCipedia transcript ID: LINC01492:1 
HGNC Gene Symbol: LINC01492    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1492
Ensembl Gene ID: ENSG00000225564
Ensembl Transcript ID: ENST00000411575
Location (hg38): chr9:103140523-103325034
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3738 bp
Exons: 10
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000411575; ENST00000411575.1; RP11-341A22.2-001; OTTHUMT00000053466.1; NONHSAT133772; ENST00000411575.5
Alternative gene names: ENSG00000225564; RP11-341A22.2; ENSG00000225564.1; OTTHUMG00000020399.1; ENSG00000225564.2; ENSG00000225564.6; LINC01492;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.5661 non-coding 
CPAT coding probability 2.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01492:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-OR13C4-4:1
3.1 lnc-OR13C4-4:1
4.0 LINC01492:1
4.1 LINC01492:1
5.0 LINC01492:1
5.1 LINC01492:1
5.2 LINC01492:1