Transcript: LINC01494:3

Basic information

LNCipedia transcript ID: LINC01494:3 
LNCipedia gene ID: LINC01494
Ensembl Gene ID: ENSG00000235024
Ensembl Transcript ID: ENST00000429343
Location (hg38): chr2:218944629-218961903
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 553 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000429343.1; AC097468.7-001; OTTHUMT00000336517.1; NONHSAT076959
Alternative gene names: ENSG00000235024.1; AC097468.7; OTTHUMG00000154666.1; ; AC097468.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.6527 non-coding 
CPAT coding probability 3.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01494:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FEV-1:1
4.0 lnc-FEV-1:1
4.1 LINC01494:3
5.0 LINC01494:3
5.1 LINC01494:3
5.2 LINC01494:3