Transcript: LINC01498:1

Basic information

LNCipedia transcript ID: LINC01498:1 
HGNC Gene Symbol: LINC01498    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1498
Ensembl Gene ID: ENSG00000247213
Ensembl Transcript ID: ENST00000502160
Location (hg38): chr12:108434130-108492585
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2984 bp
Exons: 18
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000502160; ENST00000502160.2; RP11-13G14.4-001; OTTHUMT00000404872.1; NONHSAT030548; ENST00000502160.6
Alternative gene names: ENSG00000247213; RP11-13G14.4; ENSG00000247213.2; OTTHUMG00000169577.1; ENSG00000247213.6; LINC01498;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.43 non-coding 
CPAT coding probability 7.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01498:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SART3-1:2
3.1 lnc-SART3-1:1
4.0 LINC01498:1
4.1 LINC01498:1
5.0 LINC01498:1
5.1 LINC01498:1
5.2 LINC01498:1