Transcript: LINC01501:2

Basic information

LNCipedia transcript ID: LINC01501:2 
LNCipedia gene ID: LINC01501
Location (hg38): chr9:90462432-90583157
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2431 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT133004
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 52.688 non-coding 
CPAT coding probability 69.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01501:2 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DIRAS2-1:7
4.0 LINC01501:2
4.1 LINC01501:2
5.0 LINC01501:2
5.1 LINC01501:2
5.2 LINC01501:2