Transcript: LINC01501:3

Basic information

LNCipedia transcript ID: LINC01501:3 
LNCipedia gene ID: LINC01501
RefSeq ID: NR_034157
Location (hg38): chr9:90462432-90582746
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2020 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_034157; NR_034157.1
Alternative gene names: ; LINC01501


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.8005 non-coding 
CPAT coding probability 69.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01501:3 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DIRAS2-1:8
4.0 LINC01501:3
4.1 LINC01501:3
5.0 LINC01501:3
5.1 LINC01501:3
5.2 LINC01501:3