Transcript: LINC01501:7

Basic information

LNCipedia transcript ID: LINC01501:7 
LNCipedia gene ID: LINC01501
Location (hg38): chr9:90501373-90507419
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 632 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016827; NONHSAT133008
Alternative gene names: XLOC_007770; linc-SEMA4D-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.8947 non-coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01501:7 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DIRAS2-1:4
3.1 lnc-DIRAS2-1:4
4.0 LINC01501:7
4.1 LINC01501:7
5.0 LINC01501:7
5.1 LINC01501:7
5.2 LINC01501:7