Transcript: LINC01502:5

Basic information

LNCipedia transcript ID: LINC01502:5 
HGNC Gene Symbol: LINC01502    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1502
Ensembl Gene ID: ENSG00000237339
Ensembl Transcript ID: ENST00000445997
Location (hg38): chr9:135574951-135587112
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2471 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000445997; ENST00000445997.1; RP11-98L5.2-001; OTTHUMT00000055006.1
Alternative gene names: ENSG00000237339; RP11-98L5.2; ENSG00000237339.1; OTTHUMG00000020912.1; ENSG00000237339.5; LINC01502;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.8223 non-coding 
CPAT coding probability 6.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01502:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PAEP-1:3
3.1 lnc-PAEP-1:3
4.0 LINC01502:5
4.1 LINC01502:5
5.0 LINC01502:5
5.1 LINC01502:5
5.2 LINC01502:5