Transcript: LINC01503:12

Basic information

LNCipedia transcript ID: LINC01503:12 
LNCipedia gene ID: LINC01503
Location (hg38): chr9:129336932-129359530
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 519 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT135047
Alternative gene names: lnc-PPP2R4-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -229.6556 non-coding 
CPAT coding probability 48.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01503:12 no no no no

Available literature

  1. Gao (2014), Long non-coding RNA deregulation in tongue squamous cell carcinoma., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP2R4-5:11
4.0 LINC01503:12
4.1 LINC01503:12
5.0 LINC01503:12
5.1 LINC01503:12
5.2 LINC01503:12