Transcript: LINC01503:16

Basic information

LNCipedia transcript ID: LINC01503:16 
LNCipedia gene ID: LINC01503
Location (hg38): chr9:129341529-129347489
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 779 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT135054
Alternative gene names: lnc-PPP2R4-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.7282 non-coding 
CPAT coding probability 3.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01503:16 no no no no

Available literature

  1. Gao (2014), Long non-coding RNA deregulation in tongue squamous cell carcinoma., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP2R4-5:14
4.0 LINC01503:16
4.1 LINC01503:16
5.0 LINC01503:16
5.1 LINC01503:16
5.2 LINC01503:16