Transcript: LINC01503:2

Basic information

LNCipedia transcript ID: LINC01503:2 
LNCipedia gene ID: LINC01503
Location (hg38): chr9:129332397-129359711
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2983 bp
Exons: 10
Sources: NONCODE v4
Alternative transcript names: NONHSAT135039
Alternative gene names: lnc-PPP2R4-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.0857 non-coding 
CPAT coding probability 51.89% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01503:2 no no no no

Available literature

  1. Gao (2014), Long non-coding RNA deregulation in tongue squamous cell carcinoma., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP2R4-5:5
4.0 LINC01503:2
4.1 LINC01503:2
5.0 LINC01503:2
5.1 LINC01503:2
5.2 LINC01503:2