Transcript: LINC01503:6

Basic information

LNCipedia transcript ID: LINC01503:6 
LNCipedia gene ID: LINC01503
RefSeq ID: NR_120685
Location (hg38): chr9:129336923-129347477
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 752 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120685; NR_120685.1
Alternative gene names: lnc-PPP2R4-5; LINC01503


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -45.7282 non-coding 
CPAT coding probability 31.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01503:6 no no no no

Available literature

  1. Gao (2014), Long non-coding RNA deregulation in tongue squamous cell carcinoma., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP2R4-5:16
4.0 LINC01503:6
4.1 LINC01503:6
5.0 LINC01503:6
5.1 LINC01503:6
5.2 LINC01503:6