Transcript: LINC01504:2

Basic information

LNCipedia transcript ID: LINC01504:2 
LNCipedia gene ID: LINC01504
Location (hg38): chr9:72305429-72315464
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 672 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000451596; ENST00000451596.1; RP11-63P12.6-002; OTTHUMT00000052642.1; NONHSAT131857
Alternative gene names: ENSG00000225434; RP11-63P12.6; ENSG00000225434.1; OTTHUMG00000020007.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -161.0231 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01504:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GDA-2:1
3.1 lnc-GDA-2:1
4.0 LINC01504:2
4.1 LINC01504:2
5.0 LINC01504:2
5.1 LINC01504:2
5.2 LINC01504:2