Transcript: LINC01504:3

Basic information

LNCipedia transcript ID: LINC01504:3 
HGNC Gene Symbol: LINC01504    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1504
Ensembl Gene ID: ENSG00000225434
Ensembl Transcript ID: ENST00000451596
Location (hg38): chr9:72305430-72315464
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 671 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000451596.2
Alternative gene names: ENSG00000225434.2; RP11-63P12.6; LINC01504;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -161.0231 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01504:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GDA-2:5
4.0 LINC01504:3
4.1 LINC01504:3
5.0 LINC01504:3
5.1 LINC01504:3
5.2 LINC01504:3