Transcript: LINC01505:16

Basic information

LNCipedia transcript ID: LINC01505:16 
LNCipedia gene ID: LINC01505
RefSeq ID: NR_104145
Location (hg38): chr9:106616058-106679802
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2058 bp
Exons: 7
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104145.1
Alternative gene names: LINC01505


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -45.2508 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01505:16 no no no no

Available literature

  1. Lanzós (2017), Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing Features., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01505:16
5.1 LINC01505:16
5.2 LINC01505:16