Transcript: LINC01505:4

Basic information

LNCipedia transcript ID: LINC01505:4 
LNCipedia gene ID: LINC01505
Location (hg38): chr9:106616058-106679800
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2056 bp
Exons: 7
Sources: Refseq - Dec 2014
Alternative transcript names: NR_104145
Alternative gene names: ; RP11-308N19.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.2508 non-coding 
CPAT coding probability 3.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01505:4 no no no no

Available literature

  1. Lanzós (2017), Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing Features., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF462-1:8
4.0 LINC01505:4
4.1 LINC01505:4
5.0 LINC01505:4
5.1 LINC01505:4
5.2 LINC01505:4