Transcript: LINC01507:4

Basic information

LNCipedia transcript ID: LINC01507:4 
LNCipedia gene ID: LINC01507
Location (hg38): chr9:79989860-80041847
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 613 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT132567
Alternative gene names: XLOC_000303


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.6981 non-coding 
CPAT coding probability 2.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01507:4 no no no no

Available literature

  1. Shi (2015), Circulating lncRNAs associated with occurrence of colorectal cancer progression., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TLE4-2:3
4.0 LINC01507:4
4.1 LINC01507:4
5.0 LINC01507:4
5.1 LINC01507:4
5.2 LINC01507:4