Transcript: LINC01508:6

Basic information

LNCipedia transcript ID: LINC01508:6 
LNCipedia gene ID: LINC01508
Location (hg38): chr9:90383696-90385282
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 293 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00016826
Alternative gene names: XLOC_007769; linc-SEMA4D-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.8113 non-coding 
CPAT coding probability 13.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01508:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DIRAS2-3:3
3.1 lnc-DIRAS2-2:3
4.0 LINC01508:6
4.1 LINC01508:6
5.0 LINC01508:6
5.1 LINC01508:6
5.2 LINC01508:6