Transcript: LINC01511:1

Basic information

LNCipedia transcript ID: LINC01511:1 
LNCipedia gene ID: LINC01511
RefSeq ID: NR_125810
Location (hg38): chr5:1363582-1380073
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1622 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125810; NR_125810.1
Alternative gene names: RP11-325I22.2; LINC01511


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.7269 non-coding 
CPAT coding probability 15.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01511:1 no no no no

Available literature

  1. Wang (2014), LncRNA expression profiles of EGFR exon 19 deletions in lung adenocarcinoma ascertained by using microarray analysis., Med. Oncol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLPTM1L-1:5
4.0 LINC01511:1
4.1 LINC01511:1
5.0 LINC01511:1
5.1 LINC01511:1
5.2 LINC01511:1