Transcript: LINC01517:15

Basic information

LNCipedia transcript ID: LINC01517:15 
HGNC Gene Symbol: LINC01517    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1517
Ensembl Gene ID: ENSG00000232624
Ensembl Transcript ID: ENST00000603866
Location (hg38): chr10:28806121-28813458
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 267 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT012499; ENST00000603866.1
Alternative gene names: ; ENSG00000232624.7; LINC01517


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.1442 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01517:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BAMBI-1:11
4.0 LINC01517:15
4.1 LINC01517:15
5.0 LINC01517:15
5.1 LINC01517:15
5.2 LINC01517:15