Transcript: LINC01517:2

Basic information

LNCipedia transcript ID: LINC01517:2 
LNCipedia gene ID: LINC01517
Location (hg38): chr10:28743552-28757472
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 517 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018691; NONHSAT011951
Alternative gene names: XLOC_008424; linc-LYZL1-6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.8805 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01517:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BAMBI-1:2
3.1 lnc-BAMBI-1:2
4.0 LINC01517:2
4.1 LINC01517:2
5.0 LINC01517:2
5.1 LINC01517:2
5.2 LINC01517:2