Transcript: LINC01517:20

Basic information

LNCipedia transcript ID: LINC01517:20 
HGNC Gene Symbol: LINC01517    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1517
Ensembl Gene ID: ENSG00000232624
Ensembl Transcript ID: ENST00000643204
Location (hg38): chr10:28743719-28933752
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1284 bp
Exons: 10
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000643204.1
Alternative gene names: ENSG00000232624.7; LINC01517


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.3492 non-coding 
CPAT coding probability 4.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01517:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01517:20
5.1 LINC01517:20
5.2 LINC01517:20