Transcript: LINC01517:30

Basic information

LNCipedia transcript ID: LINC01517:30 
LNCipedia gene ID: LINC01517
Location (hg38): chr10:28783558-28848233
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3262 bp
Exons: 12
Sources: Nielsen et al.,2014
Alternative transcript names: l_279_chr10:29072486-29134426_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.8654 non-coding 
CPAT coding probability 8.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01517:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf126-3:1
4.0 lnc-C10orf126-3:1
4.1 lnc-C10orf126-3:1
5.0 lnc-C10orf126-3:1
5.1 LINC01517:22
5.2 LINC01517:30