Transcript: LINC01517:34

Basic information

LNCipedia transcript ID: LINC01517:34 
HGNC Gene Symbol: LINC01517    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1517
Ensembl Gene ID: ENSG00000232624
Ensembl Transcript ID: ENST00000614533
Location (hg38): chr10:28847241-28881895
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1968 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000614533.3
Alternative gene names: ENSG00000204365.5; C10orf126; ENSG00000232624.7; LINC01517


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.2931 non-coding 
CPAT coding probability 50.12% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01517:34 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C10orf126-3:5
4.1 lnc-C10orf126-3:5
5.0 lnc-C10orf126-3:5
5.1 LINC01517:26
5.2 LINC01517:34