Transcript: LINC01517:35

Basic information

LNCipedia transcript ID: LINC01517:35 
LNCipedia gene ID: LINC01517
Location (hg38): chr10:28928579-28975289
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 709 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018147; NONHSAT012506
Alternative gene names: XLOC_008426; linc-LYZL1-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.7273 non-coding 
CPAT coding probability 5.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01517:35 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf126-2:1
3.1 lnc-C10orf126-2:1
4.0 lnc-C10orf126-2:1
4.1 lnc-C10orf126-2:1
5.0 lnc-C10orf126-2:1
5.1 LINC01517:28
5.2 LINC01517:35