Transcript: LINC01517:36

Basic information

LNCipedia transcript ID: LINC01517:36 
LNCipedia gene ID: LINC01517
Location (hg38): chr10:28928829-28934506
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 497 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT012507; FPKM1_group_3080_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -244.0758 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01517:36 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf126-2:2
4.0 lnc-C10orf126-2:2
4.1 lnc-C10orf126-2:2
5.0 lnc-C10orf126-2:2
5.1 LINC01517:29
5.2 LINC01517:36