Transcript: LINC01518:2

Basic information

LNCipedia transcript ID: LINC01518:2 
LNCipedia gene ID: LINC01518
Location (hg38): chr10:42673560-42691759
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1298 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT012920
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.0022 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01518:2 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF33B-1:3
4.0 LINC01518:2
4.1 LINC01518:2
5.0 LINC01518:2
5.1 LINC01518:2
5.2 LINC01518:2