Transcript: LINC01522:3

Basic information

LNCipedia transcript ID: LINC01522:3 
LNCipedia gene ID: LINC01522
Location (hg38): chr20:47978221-47988972
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1301 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028420; NONHSAT080113
Alternative gene names: XLOC_013772; linc-SULF2-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.2629 non-coding 
CPAT coding probability 4.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01522:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SULF2-3:2
3.1 lnc-SULF2-3:2
4.0 LINC01522:3
4.1 LINC01522:3
5.0 LINC01522:3
5.1 LINC01522:3
5.2 LINC01522:3