Transcript: LINC01524:17

Basic information

LNCipedia transcript ID: LINC01524:17 
LNCipedia gene ID: LINC01524
Location (hg38): chr20:52671875-52690608
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 809 bp
Exons: 7
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT080374; FPKM1_group_19475_transcript_5
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.0429 non-coding 
CPAT coding probability 8.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01524:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSHZ2-3:9
4.0 lnc-TSHZ2-3:9
4.1 LINC01524:17
5.0 LINC01524:17
5.1 LINC01524:17
5.2 LINC01524:17