Transcript: LINC01525:2

Basic information

LNCipedia transcript ID: LINC01525:2 
LNCipedia gene ID: LINC01525
Location (hg38): chr1:117295495-117321333
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 533 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT005475
Alternative gene names: lnc-MAN1A2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.3685 non-coding 
CPAT coding probability 3.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01525:2 no no no no

Available literature

  1. Gao (2014), Long non-coding RNA deregulation in tongue squamous cell carcinoma., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAN1A2-1:3
4.0 LINC01525:2
4.1 LINC01525:2
5.0 LINC01525:2
5.1 LINC01525:2
5.2 LINC01525:2