Transcript: LINC01532:2

Basic information

LNCipedia transcript ID: LINC01532:2 
HGNC Gene Symbol: LINC01532    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1532
Ensembl Gene ID: ENSG00000267014
Ensembl Transcript ID: ENST00000591143
RefSeq ID: NR_040036
Location (hg38): chr19:29002555-29013955
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1948 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT064084; NR_040036; ENST00000591143.1; ENST00000591143.5; NR_040036.1
Alternative gene names: ENSG00000267014.1; CTD-2081K17.2; ENSG00000267014.5; LINC01532;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.5256 non-coding 
CPAT coding probability 4.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01532:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VSTM2B-12:2
4.0 LINC01532:2
4.1 LINC01532:2
5.0 LINC01532:2
5.1 LINC01532:2
5.2 LINC01532:2