Transcript: LINC01533:14

Basic information

LNCipedia transcript ID: LINC01533:14 
HGNC Gene Symbol: LINC01533    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1533
Ensembl Gene ID: ENSG00000267779
Ensembl Transcript ID: ENST00000585739
Location (hg38): chr19:32025982-32048883
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 616 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT064170; ENST00000585739.1
Alternative gene names: ENSG00000267779.1; CTC-360P9.3; ENSG00000267779.5; LINC01533;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -149.401 non-coding 
CPAT coding probability 36.54% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01533:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF507-4:12
4.0 LINC01533:14
4.1 LINC01533:14
5.0 LINC01533:14
5.1 LINC01533:14
5.2 LINC01533:14