Transcript: LINC01533:2

Basic information

LNCipedia transcript ID: LINC01533:2 
LNCipedia gene ID: LINC01533
Location (hg38): chr19:32025862-32047773
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1822 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000504888; TCONS_00026829; NONHSAT064166
Alternative gene names: ENSG00000248887; XLOC_013038; linc-ZNF507-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -76.25 non-coding 
CPAT coding probability 5.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01533:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF507-4:2
3.1 lnc-ZNF507-4:2
4.0 LINC01533:2
4.1 LINC01533:2
5.0 LINC01533:2
5.1 LINC01533:2
5.2 LINC01533:2