Transcript: LINC01535:7

Basic information

LNCipedia transcript ID: LINC01535:7 
LNCipedia gene ID: LINC01535
Location (hg38): chr19:37251926-37256519
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 462 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000438770; ENST00000438770.1; AC012309.5-001; OTTHUMT00000109585.1
Alternative gene names: ENSG00000226686; AC012309.5; ENSG00000226686.1; OTTHUMG00000048167.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.9062 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01535:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF383-1:1
3.1 lnc-ZNF383-1:1
4.0 LINC01535:7
4.1 LINC01535:7
5.0 LINC01535:7
5.1 LINC01535:7
5.2 LINC01535:7