Transcript: LINC01547:1

Basic information

LNCipedia transcript ID: LINC01547:1 
LNCipedia gene ID: LINC01547
Location (hg38): chr21:44934726-44939913
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1100 bp
Exons: 4
Sources: Refseq - Dec 2014
Alternative transcript names: NR_027129
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.1719 non-coding 
CPAT coding probability 89.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01547:1 no no no no

Available literature

  1. Reymond (2001), From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf67-6:2
4.0 LINC01547:1
4.1 LINC01547:1
5.0 LINC01547:1
5.1 LINC01547:1
5.2 LINC01547:1