Transcript: LINC01547:2

Basic information

LNCipedia transcript ID: LINC01547:2 
LNCipedia gene ID: LINC01547
RefSeq ID: NR_027128
Location (hg38): chr21:44933284-44939913
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1833 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027128; NR_027128.1
Alternative gene names: ; LINC01547


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.3265 non-coding 
CPAT coding probability 93.89% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01547:2 no no no no

Available literature

  1. Reymond (2001), From PREDs and open reading frames to cDNA isolation: revisiting the human chromosome 21 transcription map., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf67-6:1
4.0 LINC01547:2
4.1 LINC01547:2
5.0 LINC01547:2
5.1 LINC01547:2
5.2 LINC01547:2