Transcript: LINC01551:6

Basic information

LNCipedia transcript ID: LINC01551:6 
HGNC Gene Symbol: LINC01551    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1551
Ensembl Gene ID: ENSG00000186960
Ensembl Transcript ID: ENST00000550266
Location (hg38): chr14:28785871-28792803
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 455 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT036159; ENST00000550266.1
Alternative gene names: ENSG00000186960.10; LINC01551;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -228.6549 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01551:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXG1-7:3
4.0 LINC01551:6
4.1 LINC01551:6
5.0 LINC01551:6
5.1 LINC01551:6
5.2 LINC01551:6