Transcript: LINC01556:1

Basic information

LNCipedia transcript ID: LINC01556:1 
LNCipedia gene ID: LINC01556
RefSeq ID: NR_103538
Location (hg38): chr6:28943784-28944538
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 755 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT108497; NR_103538; NR_103538.1
Alternative gene names: dJ25J6.5; LINC01556


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.0398 non-coding 
CPAT coding probability 15.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01556:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf100-11:1
4.0 LINC01556:1
4.1 LINC01556:1
5.0 LINC01556:1
5.1 LINC01556:1
5.2 LINC01556:1