Transcript: LINC01563:3

Basic information

LNCipedia transcript ID: LINC01563:3 
LNCipedia gene ID: LINC01563
RefSeq ID: NR_110896
Location (hg38): chr17:21075556-21090613
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 748 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110896; NR_110896.1
Alternative gene names: ; LINC01563


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -54.6596 non-coding 
CPAT coding probability 3.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01563:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHRS7B-2:7
4.0 LINC01563:3
4.1 LINC01563:3
5.0 LINC01563:3
5.1 LINC01563:3
5.2 LINC01563:3