Transcript: LINC01563:5

Basic information

LNCipedia transcript ID: LINC01563:5 
LNCipedia gene ID: LINC01563
Location (hg38): chr17:21075568-21117604
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 425 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025865; NONHSAT052160
Alternative gene names: XLOC_012142; linc-DHRS7B-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.6596 non-coding 
CPAT coding probability 18.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01563:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DHRS7B-2:2
3.1 lnc-DHRS7B-2:2
4.0 LINC01563:5
4.1 LINC01563:5
5.0 LINC01563:5
5.1 LINC01563:5
5.2 LINC01563:5