Transcript: LINC01567:1

Basic information

LNCipedia transcript ID: LINC01567:1 
HGNC Gene Symbol: LINC01567    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1567
Ensembl Gene ID: ENSG00000224310
Ensembl Transcript ID: ENST00000414816
RefSeq ID: NR_122072
Location (hg38): chr16:24661422-24671062
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2907 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000414816; ENST00000414816.1; AC012317.1-001; OTTHUMT00000254547.2; NONHSAT141163; NR_122072; NR_122072.1
Alternative gene names: ENSG00000224310; AC012317.1; ENSG00000224310.1; OTTHUMG00000131650.2; LINC01567;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.0242 non-coding 
CPAT coding probability 81.55% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01567:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARHGAP17-2:1
3.1 lnc-ARHGAP17-4:1
4.0 LINC01567:1
4.1 LINC01567:1
5.0 LINC01567:1
5.1 LINC01567:1
5.2 LINC01567:1