Transcript: LINC01568:8

Basic information

LNCipedia transcript ID: LINC01568:8 
HGNC Gene Symbol: LINC01568    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1568
Ensembl Gene ID: ENSG00000258779
Ensembl Transcript ID: ENST00000561875
Location (hg38): chr16:73387063-73389241
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 607 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000561875.1; RP11-140I24.1-004; OTTHUMT00000421537.1; NONHSAT143637
Alternative gene names: ENSG00000258779.2; RP11-140I24.1; OTTHUMG00000170832.2; ENSG00000258779.6; LINC01568; ; ENSG00000258779.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -188.4063 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01568:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-44L9.1.1-5:4
4.0 LINC01568:8
4.1 LINC01568:8
5.0 LINC01568:8
5.1 LINC01568:8
5.2 LINC01568:8