Transcript: LINC01569:11

Basic information

LNCipedia transcript ID: LINC01569:11 
LNCipedia gene ID: LINC01569
Location (hg38): chr16:4246104-4253706
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 876 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00024570
Alternative gene names: XLOC_011867; linc-SRL; TCONS_00024567


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.3673 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01569:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TFAP4-1:4
3.1 lnc-SRL-2:5
4.0 LINC01569:11
4.1 LINC01569:11
5.0 LINC01569:11
5.1 LINC01569:11
5.2 LINC01569:11