Transcript: LINC01569:17

Basic information

LNCipedia transcript ID: LINC01569:17 
HGNC Gene Symbol: LINC01569    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1569
Ensembl Gene ID: ENSG00000262468
Ensembl Transcript ID: ENST00000571970
Location (hg38): chr16:4246374-4251498
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 753 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000571970.1; RP11-95P2.1-003; OTTHUMT00000438091.1; ENST00000571970.5
Alternative gene names: ENSG00000262468.1; RP11-95P2.1; OTTHUMG00000177618.1; ENSG00000262468.5; LINC01569; TCONS_00024567


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.2849 non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01569:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRL-2:10
4.0 LINC01569:17
4.1 LINC01569:17
5.0 LINC01569:17
5.1 LINC01569:17
5.2 LINC01569:17