Transcript: LINC01571:6

Basic information

LNCipedia transcript ID: LINC01571:6 
LNCipedia gene ID: LINC01571
Location (hg38): chr16:51771563-51773173
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 812 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000563603.1; RP11-7O14.1-002; OTTHUMT00000422616.1; NONHSAT142486
Alternative gene names: ENSG00000260057.1; RP11-7O14.1; OTTHUMG00000173251.1; TCONS_00024399


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.6837 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01571:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-327F22.5.1-7:6
4.0 LINC01571:6
4.1 LINC01571:6
5.0 LINC01571:6
5.1 LINC01571:6
5.2 LINC01571:6