Transcript: LINC01572:14

Basic information

LNCipedia transcript ID: LINC01572:14 
LNCipedia gene ID: LINC01572
Location (hg38): chr16:72283301-72291416
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1003 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000510288; TCONS_00024273; NONHSAT143558
Alternative gene names: ENSG00000250143; XLOC_012003; linc-PMFBP1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.6018 non-coding 
CPAT coding probability 25.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01572:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PMFBP1-2:2
3.1 lnc-PMFBP1-3:2
4.0 LINC01572:14
4.1 LINC01572:14
5.0 LINC01572:14
5.1 LINC01572:14
5.2 LINC01572:14