Transcript: LINC01574:1

Basic information

LNCipedia transcript ID: LINC01574:1 
LNCipedia gene ID: LINC01574
Location (hg38): chr5:176743059-176745460
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2295 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105370
Alternative gene names: HI-LNC12; TCONS_00009551


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.2361 non-coding 
CPAT coding probability 42.70% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01574:1 no no no no

Available literature

  1. Morán (2012), Human β cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes., Cell Metab.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UNC5A-1:3
4.0 LINC01574:1
4.1 LINC01574:1
5.0 LINC01574:1
5.1 LINC01574:1
5.2 LINC01574:1